STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TTE2704Putative phosphomannomutase; Predicted by orpheus program; predicted by glimmer program. (569 aa)    
Predicted Functional Partners:
YPO2263
Putative mannose-6-phosphate isomer; Predicted by orpheus program; predicted by glimmer program; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.922
XCC2797
Hypothetical sugar phosphate isomerase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.584
T3212
Putative dihydropteroate synthase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.564
trpS
Putative tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
      0.516
S0616
Putative phosphoglucomutase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.503
PBPRA0352
Hypothetical intercellular adhesion protein A; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.475
VVA0079
Putative 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.454
SF0851
Putative ATPase protein; Predicted by orpheus program; predicted by glimmer program.
  
   0.442
PLU3743
Hypothetical tyrosine-protein kinase Wzc; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.422
SF0100
Hypothetical dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
   
 0.422
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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