STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CHEV-3Putative chemotaxis protein; Predicted by orpheus program; predicted by glimmer program. (174 aa)    
Predicted Functional Partners:
PSPTO198
Putative chemotaxis protein CheA; Predicted by orpheus program; predicted by glimmer program.
 
 0.999
PBPRA0774
Hypothetical chemotaxis histidine protein kinase, CheA; Predicted by orpheus program; predicted by glimmer program.
 
 0.998
VP0773
Hypothetical chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.997
AER-2
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.991
PA1561
Putative methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.991
AER-2-2
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.990
PLU4008
Putative sensor histidine kinase FexB; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.982
PBPRA0989
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.979
PBPRB0365
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.979
PBPRB0367
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.976
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.