STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHEV-3Putative chemotaxis protein; Predicted by orpheus program; predicted by glimmer program. (174 aa)    
Predicted Functional Partners:
PBPRA0774
Hypothetical chemotaxis histidine protein kinase, CheA; Predicted by orpheus program; predicted by glimmer program.
 
 0.999
PSPTO198
Putative chemotaxis protein CheA; Predicted by orpheus program; predicted by glimmer program.
 
 0.999
VP0773
Hypothetical chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.998
AER-2
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.993
AER-2-2
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.993
PA1561
Putative methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.993
PBPRA0989
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.987
PBPRB0365
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.987
PBPRB0367
Hypothetical methyl-accepting chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.986
SO3208
Putative chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 
 0.979
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.