STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO3317Hypothetical 5`-nucleotidase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family. (586 aa)    
Predicted Functional Partners:
SF4273
Putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
 
 
 0.977
CPDC
Putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
 
 
0.930
ECS0533
Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
  
  
 
0.925
SO1218
Putative thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
 
  
  0.917
surE
Putative acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.916
YJJG
Putative haloacid dehalogenase-like hydrolase family protein; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.916
PBPRB1892
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the 5'-nucleotidase family.
  
  
 
0.916
T0346
Putative inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.915
PLU1241
Putative xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
 
  
 0.915
UDK
Putative uridine kinase; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.914
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.