STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLPQPutative glycerophosphoryl diester phosphodiesterase; Predicted by orpheus program; predicted by glimmer program. (101 aa)    
Predicted Functional Partners:
Y0438
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
  
  0.984
T0582
Putative glycerophosphoryl diester phosphodiesterase; Predicted by orpheus program; predicted by glimmer program.
  
  
0.928
T3336
Putative lysophospholipase; Predicted by orpheus program; predicted by glimmer program.
    
 0.904
Z5346
Hypothetical lysophospholipase L2; Predicted by orpheus program; predicted by glimmer program.
    
 0.904
Y0047
Putative ATP:glycerol 3-phosphotransferase (Glycerokinase)(GK); Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.655
PBPRB1004
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
       0.572
GLPF
Putative glycerol uptake facilitator protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.457
PA4034
Putative aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.457
Y0404
Putative anaerobic glycerol-3-phosphate dehydrogenase, subunit A; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.450
PP5327
Putative phosphate ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.430
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.