Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGR_PAT_-3 | LOLA | PBPRA1553 | PBPRA1163 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.839 |
| AGR_PAT_-3 | VPA0557 | PBPRA1553 | PBPRB1127 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.434 |
| AGR_PAT_-3 | VPA0558 | PBPRA1553 | PBPRB1126 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.697 |
| AGR_PAT_-3 | VPA0559 | PBPRA1553 | PBPRB1125 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.738 |
| LOLA | AGR_PAT_-3 | PBPRA1163 | PBPRA1553 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | 0.839 |
| LOLA | PHNL | PBPRA1163 | PBPRB0368 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | 0.434 |
| LOLA | STY1258 | PBPRA1163 | PBPRA2389 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.839 |
| LOLA | VPA0558 | PBPRA1163 | PBPRB1126 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.760 |
| LOLA | VPA0559 | PBPRA1163 | PBPRB1125 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.760 |
| LOLA | VPA0560 | PBPRA1163 | PBPRA0650 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative ABC transporter ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | 0.434 |
| LOLA | VPA0871 | PBPRA1163 | PBPRA0373 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative ABC transporter; Predicted by orpheus program; predicted by glimmer program. | 0.839 |
| LOLA | VV21004 | PBPRA1163 | PBPRB1124 | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | 0.434 |
| PHNL | LOLA | PBPRB0368 | PBPRA1163 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.434 |
| PHNL | VPA0557 | PBPRB0368 | PBPRB1127 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.453 |
| PHNL | VPA0558 | PBPRB0368 | PBPRB1126 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.676 |
| PHNL | VPA0559 | PBPRB0368 | PBPRB1125 | Putative ABC transporter, ATP-binding protein; Predicted by orpheus program; predicted by glimmer program. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.740 |
| STY1258 | LOLA | PBPRA2389 | PBPRA1163 | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Hypothetical outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.839 |
| STY1258 | VPA0557 | PBPRA2389 | PBPRB1127 | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.434 |
| STY1258 | VPA0558 | PBPRA2389 | PBPRB1126 | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.727 |
| STY1258 | VPA0559 | PBPRA2389 | PBPRB1125 | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. | 0.746 |
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