STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VVA1230Hypothetical protein; Predicted by orpheus program; predicted by glimmer program. (161 aa)    
Predicted Functional Partners:
VP1757
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
    0.962
SO4291
Putative phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 
 0.940
PP5327
Putative phosphate ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.935
SP2086
Putative phosphate ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.842
VV0730
Putative ABC-type phosphate transport system,ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
 
 0.782
VVA0372
Putative phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
 
 0.782
VVA0915-2
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
     0.586
VVA0915
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.579
VP1755
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
     
 0.578
PBPRB1152
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
     
 0.576
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.