STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XCC0591Putative fumarylacetoacetate hydrolase family protein; Predicted by orpheus program; predicted by glimmer program. (340 aa)    
Predicted Functional Partners:
ECS3028
Putative glutathione S-transferase family protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.996
HMGA
Putative oxidoreductase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.972
BPP3767
Putative 4-hydroxyphenylpyruvate dioxygenase; Predicted by orpheus program; predicted by glimmer program.
 
  
 0.916
XAC1542
Putative fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
  0.822
YPO1111
Putative succinate dehydrogenase, flavoprotein subunit; Predicted by orpheus program; predicted by glimmer program; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
  0.821
S4577
Putative Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Predicted by orpheus program; predicted by glimmer program.
  
 
  0.821
STY0778
Putative succinate dehydrogenase, iron-sulfur protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
  0.811
T4394
Putative fumarate reductase, iron-sulfur protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
  0.811
Y3071
Putative succinate dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
   
 
  0.806
YPO1110
Putative succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
 
  0.806
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.