Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SO0080Putative thioesterase; Predicted by orpheus program; predicted by glimmer program. (150 aa)    
Predicted Functional Partners:
PBPRA1667
Putative Beta-ketoacyl synthase; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.770
PFAA
Omega-3 polyunsaturated fatty acid synthase PfaA; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.707
C4793
Putative fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 
 0.664
PFAC
Omega-3 polyunsaturated fatty acid synthase PfaC; Predicted by orpheus program; predicted by glimmer program; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.548
PBPRB0014
Hypothetical acyltransferase family protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.539
SO2777
Putative malonyl Coa-acyl carrier protein transacylase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.525
S3567
Putative glycerol-3-phosphate acyltransferase; Predicted by orpheus program; predicted by glimmer program; Belongs to the GPAT/DAPAT family.
   
 
 0.523
CV3084
Putative NAD-glutamate dehydrogenase; Predicted by orpheus program; predicted by glimmer program.
  
    0.520
PA3092
Putative 2,4-dienoyl-CoA reductase; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.504
VV2121
Putative fatty acid metabolism regulatorprotein; Multifunctional regulator of fatty acid metabolism.
      
 0.467
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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