Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLU0248Hypothetical protein; Predicted by orpheus program; predicted by glimmer program. (95 aa)    
Predicted Functional Partners:
GLTS
Putative glutamate permease; Predicted by orpheus program; predicted by glimmer program.
 
     0.927
HD1707
Putative sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
  
     0.694
WS0635
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
    0.596
PBPRB1793
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.547
SMA0665
Putative membrane protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.495
VV20541
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
   
    0.482
VC2323
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
   
    0.482
BP2180
Hipothetical membrane protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.472
C3973
Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.
      
 0.453
BH1728
Putative glutamate synthase, large subunit; Predicted by orpheus program; predicted by glimmer program.
      
 0.453
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.