STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SA2453Putative peptide methionine sulfoxidereductase; Predicted by orpheus program; predicted by glimmer program. (141 aa)    
Predicted Functional Partners:
MSRB
Putative PilB-related protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.990
VP2006
Putative suppressor for copper-sensitivity B precursor; Predicted by orpheus program; predicted by glimmer program.
   
 
 0.755
C2732
Putative thiol:disulfide interchange protein DsbE; Predicted by orpheus program; predicted by glimmer program.
   
 0.700
PHG219
Hypothetical thiol:disulfide interchange protein DsbE; Predicted by orpheus program; predicted by glimmer program.
   
 0.700
T1804
Hypothetical thioredoxin; Predicted by orpheus program; predicted by glimmer program.
   
 0.700
ASL7641
Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
   
 0.685
NMB0946
Putative peroxiredoxin/glutaredoxin family protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.578
CPE0911
Putative glutathione peroxidase; Predicted by orpheus program; predicted by glimmer program; Belongs to the glutathione peroxidase family.
  
 
 0.523
METH
Putative cobalamin-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.483
NMA1141
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.473
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.