STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ECS4691Putative ribose ABC transporter; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (504 aa)    
Predicted Functional Partners:
PLU0057
Putative ribose ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
 0.997
Z5252
Putative ribose ABC transporter, periplasmic D-ribose-binding protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.994
C4676
Hypothetical ribose ABC transporter protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.958
CTC00906
Putative sugar ABC transporter (permease); Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
 
 0.899
CV3017
Putative permease of ABC transporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
 
 0.898
PBPRB0019
Putative AraH,Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.894
ATU4322
Putative ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.894
ATU4551
Putative sugar ABC transporter, periplasmic sugar-binding; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.887
MGLC
Putative galactoside ABC transporter, permease protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
  
 0.832
RSP1635
Putative inner membrane permease of D-xyloseABC transporter; Predicted by orpheus program; predicted by glimmer program; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.816
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.