STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SMC02239Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (146 aa)    
Predicted Functional Partners:
ECS2459
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.760
PBPRB1303
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
    0.586
PBPRB1690
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
    0.581
RS01682-2
Hypothetical transcriptional regulator; Predicted by orpheus program; predicted by glimmer program; Belongs to the LysR transcriptional regulatory family.
       0.565
VVA0998
Hypothetical transcriptional regulator, TetR family; Predicted by orpheus program; predicted by glimmer program.
 
     0.451
SF2780
Putative sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
    0.449
PP3439
Hypothetical transcriptional regulator; Predicted by orpheus program; predicted by glimmer program.
  
    0.421
AHPC
Putative antioxidant, AhpC/Tsa family; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.411
Y0988
Putative antioxidant, AhpC/Tsa family; Predicted by orpheus program; predicted by glimmer program.
  
  
 0.411
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.