Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CV0979Putative PTS system, glucose-specific IIBC component; Predicted by orpheus program; predicted by glimmer program. (480 aa)    
Predicted Functional Partners:
PLU1392
Putative PTS system, glucose-specific IIAcomponent; Predicted by orpheus program; predicted by glimmer program.
 0.999
PGI
Putative Glucose-6-phosphate isomerase; Predicted by orpheus program; predicted by glimmer program.
    
 0.930
SF1105
Putative PTS system, glucose-specific IIBC; Predicted by orpheus program; predicted by glimmer program.
 
 
0.926
Y1767
Putative PTS system, glucose-specific IIBCcomponent; Predicted by orpheus program; predicted by glimmer program.
 
 
0.926
Y1488
Putative phosphocarrier protein HPr; Predicted by orpheus program; predicted by glimmer program.
  
 
 0.923
S0616
Putative phosphoglucomutase; Predicted by orpheus program; predicted by glimmer program.
    
  0.916
Z2820
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the glucose-6-phosphate 1-epimerase family.
     
  0.900
CHB
Hypothetical N-acetyl-beta-hexosaminidase; Predicted by orpheus program; predicted by glimmer program.
  
    0.895
PLU1324
Putative beta-N-acetylhexosaminidase; Predicted by orpheus program; predicted by glimmer program.
  
    0.895
VV20591
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
    0.895
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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