STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S3273Conserved hypothetical protein; Predicted by orpheus program; predicted by glimmer program. (194 aa)    
Predicted Functional Partners:
KEFC
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
 
 
 0.871
RS00549
Putative TrkA family protein; Predicted by orpheus program; predicted by glimmer program; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
 
 0.870
VV3043
Putative glutathione-regulated potassium-effluxsystem protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
 
 
 0.866
AAT
Putative aspartate aminotransferase; Predicted by orpheus program; predicted by glimmer program.
   
    0.742
LL2032
Hypothetical aminotransferase; Predicted by orpheus program; predicted by glimmer program.
   
    0.742
EF2774
Hypothetical transcriptional regulator; Predicted by orpheus program; predicted by glimmer program.
 
   
 0.711
SPR0370
Hypothetical alkylhydroperoxidase AhpD domain protein; Predicted by orpheus program; predicted by glimmer program.
 
     0.652
VC2607
Putative NAD(P)H oxidoreductase; Predicted by orpheus program; predicted by glimmer program.
 
   
 0.434
RSC3097
Putative NAD(P)H oxidoreductase; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.
 
   
 0.427
PBPRA1346
Hypothetical protein; Predicted by orpheus program; predicted by glimmer program.
  
     0.409
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.