STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBPRB1750Hypothetical protein; Predicted by orpheus program; predicted by glimmer program. (577 aa)    
Predicted Functional Partners:
PBPRA0774
Hypothetical chemotaxis histidine protein kinase, CheA; Predicted by orpheus program; predicted by glimmer program.
 
 0.959
PSPTO198
Putative chemotaxis protein CheA; Predicted by orpheus program; predicted by glimmer program.
 
 0.959
PA1464
Putative purine-binding chemotaxis protein CheW; Predicted by orpheus program; predicted by glimmer program.
 
 0.958
PP4393
Putative chemotaxis CheV; Predicted by orpheus program; predicted by glimmer program.
 
 0.957
CHEV-3
Putative chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.954
VP0773
Hypothetical chemotaxis protein; Predicted by orpheus program; predicted by glimmer program.
 
 0.954
PSPTO198-2
Protein-glutamate methylesterase, chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.937
XAC1888
Protein-glutamate methylesterase/protein-glutamine glutaminase 1; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.935
PSPTO192
Putative chemotaxis protein methyltransferase CheR; Predicted by orpheus program; predicted by glimmer program.
 
 0.935
S2024
Hypothetical chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.934
Your Current Organism:
Photobacterium profundum
NCBI taxonomy Id: 298386
Other names: P. profundum SS9, Photobacterium SS9, Photobacterium profundum SS9, Photobacterium profundum str. SS9, Photobacterium profundum strain SS9, Photobacterium sp. (strain SS9), Photobacterium sp. SS9, deep-sea eubacterium SS9
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