A0A1V6RN79 protein (Penicillium vulpinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6RN79

ANK_REP_REGION domain-containing protein. (1128 aa)

Predicted Functional Partners:

A0A1V6RUF6

0.557

A0A1V6S4L6

0.557

A0A1V6SAH3

0.557

A0A1V6S3J8

0.544

A0A1V6S1Q6

0.521

A0A1V6RTQ2

0.508

A0A1V6RTJ2

0.507

A0A1V6RU44

0.503

A0A1V6RYD4

0.502

A0A1V6RCU6

0.498

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6RCU6	A0A1V6RN79	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.498
A0A1V6RCU6	A0A1V6RTJ2	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6RCU6	A0A1V6RYD4	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.999
A0A1V6RCU6	A0A1V6S1Q6	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A1V6RN79	A0A1V6RCU6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.498
A0A1V6RN79	A0A1V6RTJ2	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.507
A0A1V6RN79	A0A1V6RTQ2	ANK_REP_REGION domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.508
A0A1V6RN79	A0A1V6RU44	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.503
A0A1V6RN79	A0A1V6RUF6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.557
A0A1V6RN79	A0A1V6RYD4	ANK_REP_REGION domain-containing protein.	L51_S25_CI-B8 domain-containing protein.	0.502
A0A1V6RN79	A0A1V6S1Q6	ANK_REP_REGION domain-containing protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.521
A0A1V6RN79	A0A1V6S3J8	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.544
A0A1V6RN79	A0A1V6S4L6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.557
A0A1V6RN79	A0A1V6SAH3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.557
A0A1V6RTJ2	A0A1V6RCU6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1V6RTJ2	A0A1V6RN79	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.507
A0A1V6RTJ2	A0A1V6RYD4	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.999
A0A1V6RTJ2	A0A1V6S1Q6	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A1V6RTQ2	A0A1V6RN79	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	ANK_REP_REGION domain-containing protein.	0.508
A0A1V6RU44	A0A1V6RN79	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.503