STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6S3Y3Uncharacterized protein. (1125 aa)    
Predicted Functional Partners:
A0A1V6R9X7
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.996
A0A1V6RZ22
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.988
A0A1V6RTJ0
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.984
A0A1V6RTV4
tRNA-binding domain-containing protein.
  
 0.984
A0A1V6S3A7
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.983
A0A1V6RHZ4
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.974
A0A1V6SBU2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.965
A0A1V6REB0
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.947
A0A1V6S1X8
Lysine--tRNA ligase.
  
 0.944
A0A1V6RMB5
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.925
Your Current Organism:
Penicillium vulpinum
NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme
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