STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6S8R3NET domain-containing protein. (231 aa)    
Predicted Functional Partners:
A0A1V6RZZ8
Uncharacterized protein.
   
 0.973
A0A1V6RIM7
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.969
A0A1V6S2W3
RPOLD domain-containing protein.
   
 0.954
A0A1V6RML4
RPOL9 domain-containing protein.
    
 0.947
A0A1V6RVW7
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.944
A0A1V6S5U9
RPOL4c domain-containing protein.
   
 0.941
A0A1V6S0V3
RNA_pol_L_2 domain-containing protein.
   
 0.934
A0A1V6RTW3
Uncharacterized protein.
    
 
 0.915
A0A1V6R4Q4
Uncharacterized protein.
    
 
 0.912
A0A1V6RWV5
Myb-like domain-containing protein.
   
 0.912
Your Current Organism:
Penicillium vulpinum
NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme
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