A0A1V6SA89 protein (Penicillium vulpinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6SA89

Uncharacterized protein. (412 aa)

Predicted Functional Partners:

A0A1V6RTH7

0.589

A0A1V6S6U8

0.554

A0A1V6RCD3

0.538

A0A1V6RCU7

0.538

A0A1V6S111

0.538

A0A1V6RTN8

0.526

A0A1V6R9L1

0.518

A0A1V6RXT7

0.507

A0A1V6SCH5

0.481

A0A1V6R3H5

0.477

Your Current Organism:

Penicillium vulpinum

NCBI taxonomy Id: 29845
Other names: P. vulpinum, Penicillium claviforme

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6R3H5	A0A1V6R9L1	Uncharacterized protein.	AMP-binding domain-containing protein.	0.737
A0A1V6R3H5	A0A1V6RCD3	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A1V6R3H5	A0A1V6RCU7	Uncharacterized protein.	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	0.559
A0A1V6R3H5	A0A1V6S111	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A1V6R3H5	A0A1V6SA89	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A1V6R3H5	A0A1V6SCH5	Uncharacterized protein.	Uncharacterized protein.	0.686
A0A1V6R9L1	A0A1V6R3H5	AMP-binding domain-containing protein.	Uncharacterized protein.	0.737
A0A1V6R9L1	A0A1V6SA89	AMP-binding domain-containing protein.	Uncharacterized protein.	0.518
A0A1V6R9L1	A0A1V6SCH5	AMP-binding domain-containing protein.	Uncharacterized protein.	0.701
A0A1V6RCD3	A0A1V6R3H5	Uncharacterized protein.	Uncharacterized protein.	0.559
A0A1V6RCD3	A0A1V6SA89	Uncharacterized protein.	Uncharacterized protein.	0.538
A0A1V6RCD3	A0A1V6SCH5	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A1V6RCU7	A0A1V6R3H5	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	Uncharacterized protein.	0.559
A0A1V6RCU7	A0A1V6SA89	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	Uncharacterized protein.	0.538
A0A1V6RCU7	A0A1V6SCH5	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	Uncharacterized protein.	0.502
A0A1V6RTH7	A0A1V6RTN8	Uncharacterized protein.	Uncharacterized protein.	0.804
A0A1V6RTH7	A0A1V6RXT7	Uncharacterized protein.	Uncharacterized protein.	0.824
A0A1V6RTH7	A0A1V6S6U8	Uncharacterized protein.	Uncharacterized protein.	0.791
A0A1V6RTH7	A0A1V6SA89	Uncharacterized protein.	Uncharacterized protein.	0.589
A0A1V6RTN8	A0A1V6RTH7	Uncharacterized protein.	Uncharacterized protein.	0.804