Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABW12615.1KEGG: msm:MSMEG_1422 hypothetical protein. (103 aa)    
Predicted Functional Partners:
ABW12614.1
PFAM: Radical SAM domain protein; KEGG: fal:FRAAL3572 coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E).
  
 0.984
ABW12612.1
PFAM: Creatininase; KEGG: sen:SACE_2391 creatininase.
 
  
 0.932
ABW12613.1
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rha:RHA1_ro06073 probable FMN-dependent (S)-2-hydroxy-acid oxidase.
 
  
 0.915
ABW12729.1
PFAM: Radical SAM domain protein; KEGG: fal:FRAAL3572 coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E).
  
 0.911
ABW12610.1
PFAM: regulatory protein TetR; KEGG: fal:FRAAL4318 putative TetR family transcriptional regulator.
 
   
 0.876
ABW12611.1
KEGG: sen:SACE_2392 short-chain dehydrogenase/reductase SDR.
 
   
 0.830
ABW12727.1
PFAM: glycosyl transferase family 2; KEGG: sen:SACE_2393 probable membrane sugar transferase.
 
   
 0.822
ABW12731.1
PFAM: regulatory protein TetR; KEGG: nfa:nfa32100 putative transcriptional regulator.
 
   
 0.744
ABW13866.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fal:FRAAL2525 putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.730
ABW13963.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mav:MAV_0479 carveol dehydrogenase.
  
   
 0.723
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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