STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW12891.1Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: fal:FRAAL0334 activator protein. (257 aa)    
Predicted Functional Partners:
ABW12843.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: TIR protein; Tetratricopeptide domain protein; KEGG: sen:SACE_0488 transcriptional regulator, SARP family.
  
 0.929
ABW12885.1
KEGG: fal:FRAAL4074 hypothetical protein; Belongs to the UPF0255 family.
 
     0.571
ABW09595.1
KEGG: mva:Mvan_2284 transcriptional regulator, winged helix family.
  
 0.549
ABW14820.1
Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: rrs:RoseRS_1512 response regulator receiver and SARP domain protein.
  
   
 0.515
ABW12886.1
PFAM: catalytic domain of components of various dehydrogenase complexes; KEGG: fal:FRAAL4075 hypothetical protein.
 
     0.477
ABW11711.1
PFAM: protein of unknown function DUF742; KEGG: fal:FRAAL4351 hypothetical protein.
  
     0.462
ABW12890.1
TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: sco:SCO0072 secreted protein.
 
     0.454
ABW12889.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: fal:FRAAL4077 3-oxoacyl-[acyl-carrier-protein] synthase III.
 
     0.446
ABW16129.1
PFAM: regulatory protein LuxR; KEGG: sco:SCO5065 transcriptional regulator.
 
  
 0.441
ABW09539.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: rha:RHA1_ro02391 probable transcriptional regulator.
 
  
 0.440
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.