STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW12946.1KEGG: rrs:RoseRS_3090 hypothetical protein. (186 aa)    
Predicted Functional Partners:
ABW10931.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: sma:SAV2330 assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.957
ABW12942.1
PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3086 periplasmic binding protein.
 
   
 0.936
ABW15434.1
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: fal:FRAAL1036 NADH-quinone oxidoreductase chain E (NADH dehydrogenase I, chain E) (NDH-1, chain E).
  
 
 0.924
ABW12944.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3089 ABC transporter related.
 
     0.879
ABW12943.1
PFAM: transport system permease protein; KEGG: rrs:RoseRS_3088 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.877
ABW13546.1
TIGRFAM: precorrin-4 C11-methyltransferase; precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: sco:SCO1857 putative bifunctional protein (CbiGH).
     
 0.826
ABW12945.1
KEGG: tfu:Tfu_2298 hypothetical protein.
 
     0.811
ABW16163.1
KEGG: mva:Mvan_0222 conserved hypothetical protein.
  
     0.664
ABW14836.1
Hypothetical protein; KEGG: rba:RB10310 NADH dehydrogenase (ubiquinone) chain M.
  
  
 0.586
ABW15426.1
KEGG: fal:FRAAL1044 NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
  
 0.586
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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