STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW14132.1Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMb20626 putative transcriptional regulator, AraC family protein. (312 aa)    
Predicted Functional Partners:
ABW11077.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mva:Mvan_4276 transcriptional regulator, AraC family.
  
     0.642
ABW12278.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sen:SACE_7337 AraC-family transcriptional regulator.
 
 
 0.641
ABW10175.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; KEGG: mgi:Mflv_2370 transcriptional regulator, AraC family.
 
 
 0.636
ABW12717.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: fal:FRAAL3700 putative transcriptional regulator.
 
 
 0.623
ABW11440.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rha:RHA1_ro04814 possible transcriptional regulator, AraC family.
 
 
 0.619
ABW13739.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sma:SAV6392 AraC-family transcriptional regulator.
 
 
 0.572
ABW14703.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sma:SAV6392 AraC-family transcriptional regulator.
 
 
 0.568
ABW11772.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sma:SAV653 AraC-family transcriptional regulator.
 
 
 0.560
ABW12279.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sma:SAV6392 AraC-family transcriptional regulator.
 
 
 0.555
ABW11836.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mgi:Mflv_2370 transcriptional regulator, AraC family.
  
     0.533
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.