STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW15463.1PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: fal:FRAAL1002 putative cytochrome c biogenesis membrane protein. (342 aa)    
Predicted Functional Partners:
ABW15464.1
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: fal:FRAAL1001 thiol:disulfide interchange protein HelX precursor (cytochrome c biogenesis protein HelX).
 
  
 0.973
ABW15461.1
PFAM: cytochrome c assembly protein; KEGG: fal:FRAAL1004 putative cytochrome c assembly protein.
 
  
 0.960
ABW15462.1
PFAM: ResB family protein; KEGG: fal:FRAAL1003 putative cytochrome c biogenesis membrane protein.
 
  
 0.948
ABW10053.1
PFAM: Redoxin domain protein; KEGG: fal:FRAAL1001 thiol:disulfide interchange protein HelX precursor (cytochrome c biogenesis protein HelX).
 
  
 0.848
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: fal:FRAAL0997 glutamate-1-semialdehyde aminotransferase (aminomutase), PLP-dependent.
  
  
 0.775
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.765
ABW15466.1
PFAM: Phosphoglycerate mutase; KEGG: fal:FRAAL0998 probable phosphoglycerate mutase (phosphoglyceromutase) (PgaM).
  
  
 0.745
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.732
ABW11247.1
PFAM: cytochrome c oxidase subunit III; KEGG: fal:FRAAL5112 cytochrome c oxidase polypeptide III (cytochrome AA3 subunit 3).
  
   
 0.688
ABW10405.1
PFAM: aminotransferase class-III; KEGG: fal:FRAAL6024 putative glutamate-1-semialdehyde aminotransferase (aminomutase), PLP-dependent; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.640
Your Current Organism:
Frankia sp. EAN1pec
NCBI taxonomy Id: 298653
Other names: F. sp. EAN1pec
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