STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP79401.1KEGG: sma:SAV_2702 hypothetical protein. (92 aa)    
Predicted Functional Partners:
ADP79400.1
PFAM: carboxyl transferase; KEGG: sco:SCO6284 decarboxylase.
       0.773
ADP79399.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: mlo:mlr3236 oxidoreductase.
       0.485
ADP79395.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_1085 binding-protein-dependent transport systems inner membrane component.
       0.401
ADP79396.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3177 binding-protein-dependent transport systems inner membrane component.
       0.401
ADP79397.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mlo:mll7347 ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.401
ADP79398.1
KEGG: fal:FRAAL0590 putative taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
       0.401
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.