STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP79493.1WD40 repeat, subgroup; KEGG: fal:FRAAL1754 hypothetical protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; TIR protein. (464 aa)    
Predicted Functional Partners:
ADP81376.1
NB-ARC domain protein; KEGG: fal:FRAAL3617 WD repeat-containing protein; PFAM: NB-ARC domain protein; WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein.
 
 
 
 0.804
ADP78501.1
PFAM: NB-ARC domain protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: fal:FRAAL4996 putative ATP/GTP-binding protein.
 0.776
ADP79499.1
KEGG: ter:Tery_2811 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat.
 
 0.773
ADP81030.1
KEGG: nfa:pnf2450 hypothetical protein.
 0.748
ADP84368.1
PFAM: NB-ARC domain protein; KEGG: gob:Gobs_1167 putative ATP/GTP binding protein.
 0.738
ADP81922.1
Hypothetical protein; KEGG: sco:SCO4632 ATP/GTP binding protein.
 0.729
ADP82497.1
PFAM: NB-ARC domain protein; KEGG: sco:SCO5629 ATP/GTP-binding protein.
 0.728
ADP79365.1
Hypothetical protein; KEGG: cai:Caci_6844 tetratricopeptide TPR_4.
 
 0.708
ADP79538.1
PFAM: sigma-70 region 2 domain protein; KEGG: gob:Gobs_1167 putative ATP/GTP binding protein; Belongs to the sigma-70 factor family.
 
 0.678
ADP82804.1
SMART: Tetratricopeptide repeat; KEGG: mlo:mll5190 hypothetical protein.
 
 0.673
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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