STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP79659.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: tcu:Tcur_4793 protein of unknown function DUF6 transmembrane. (325 aa)    
Predicted Functional Partners:
ADP81931.1
Redoxin domain protein; KEGG: cai:Caci_3496 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; manually curated; PFAM: Redoxin domain protein; cytochrome c biogenesis protein transmembrane region.
  
 0.636
ADP79658.1
PFAM: protein of unknown function DUF1470; Zinc finger, CGNR; KEGG: nca:Noca_1791 hypothetical protein.
     
 0.601
ADP84734.1
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sti:Sthe_2638 YbaK/prolyl-tRNA synthetase associated region.
 
   
 0.473
ADP84284.1
PFAM: Redoxin domain protein; KEGG: fal:FRAAL1001 thiol:disulfide interchange protein HelX precursor (cytochrome c biogenesis protein HelX).
   
 0.470
ADP84329.1
KEGG: fal:FRAAL0941 putative thioredoxin.
   
 0.470
ADP84606.1
KEGG: tcu:Tcur_2549 tetratricopeptide TPR_2 repeat protein.
  
     0.467
ADP79781.1
KEGG: fal:FRAAL5188 hypothetical protein.
 
 
 0.463
ADP84607.1
KEGG: sro:Sros_6920 hypothetical protein.
 
   
 0.447
ADP84995.1
SMART: Tetratricopeptide repeat; KEGG: tcu:Tcur_2549 tetratricopeptide TPR_2 repeat protein.
  
     0.445
ADP79657.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: nca:Noca_1792 hypothetical protein.
       0.429
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.