STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP80457.1PFAM: Hemolysin-type calcium-binding region; KEGG: rpb:RPB_0803 5'-nucleotidase. (210 aa)    
Predicted Functional Partners:
ADP82918.1
Protein serine/threonine phosphatase; KEGG: fal:FRAAL4851 putative regulatory protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein.
 
  
 0.627
ADP80456.1
Transcriptional regulator, MarR family; KEGG: sro:Sros_4634 transcriptional regulators-like protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
  
 0.605
ADP80230.1
KEGG: fal:FRAAL1998 putative competence protein; putative integral membrane protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.536
ADP84015.1
PAS fold-3 domain protein; KEGG: fal:FRAAL1318 putative two-component hybrid sensor and regulator; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
  
 0.487
ADP82709.1
KEGG: fal:FRAAL1741 putative ABC transporter ATP-binding protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
  
  
 0.459
ADP78407.1
KEGG: fal:FRAAL6574 anti-sigma-B factor antagonist (anti-anti-sigma-B factor); TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
 
    0.449
ADP80455.1
KEGG: vap:Vapar_4017 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
  
 0.430
ADP83037.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: fal:FRAAL0771 signaling protein; SMART: GGDEF domain containing protein; PAS domain containing protein.
  
 
 0.427
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.420
ADP83562.1
Forkhead-associated protein; KEGG: fal:FRAAL1896 putative ABC transporter ATP-binding protein; putative membrane protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
  
  
 0.414
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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