Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADP80477.1 | ADP80479.1 | FraEuI1c_2443 | FraEuI1c_2445 | PFAM: protein of unknown function zinc metallopeptidase; KEGG: fal:FRAAL5601 putative metalloprotease. | Hypothetical protein; KEGG: ath:AT3G17830 DNAJ heat shock family protein. | 0.416 |
ADP80478.1 | ADP80479.1 | FraEuI1c_2444 | FraEuI1c_2445 | Hypothetical protein; KEGG: dvm:DvMF_2554 acidic cytochrome c3. | Hypothetical protein; KEGG: ath:AT3G17830 DNAJ heat shock family protein. | 0.773 |
ADP80478.1 | ADP80480.1 | FraEuI1c_2444 | FraEuI1c_2446 | Hypothetical protein; KEGG: dvm:DvMF_2554 acidic cytochrome c3. | KEGG: fal:FRAAL4404 hypothetical protein. | 0.436 |
ADP80479.1 | ADP80477.1 | FraEuI1c_2445 | FraEuI1c_2443 | Hypothetical protein; KEGG: ath:AT3G17830 DNAJ heat shock family protein. | PFAM: protein of unknown function zinc metallopeptidase; KEGG: fal:FRAAL5601 putative metalloprotease. | 0.416 |
ADP80479.1 | ADP80478.1 | FraEuI1c_2445 | FraEuI1c_2444 | Hypothetical protein; KEGG: ath:AT3G17830 DNAJ heat shock family protein. | Hypothetical protein; KEGG: dvm:DvMF_2554 acidic cytochrome c3. | 0.773 |
ADP80479.1 | ADP80480.1 | FraEuI1c_2445 | FraEuI1c_2446 | Hypothetical protein; KEGG: ath:AT3G17830 DNAJ heat shock family protein. | KEGG: fal:FRAAL4404 hypothetical protein. | 0.455 |
ADP80480.1 | ADP80478.1 | FraEuI1c_2446 | FraEuI1c_2444 | KEGG: fal:FRAAL4404 hypothetical protein. | Hypothetical protein; KEGG: dvm:DvMF_2554 acidic cytochrome c3. | 0.436 |
ADP80480.1 | ADP80479.1 | FraEuI1c_2446 | FraEuI1c_2445 | KEGG: fal:FRAAL4404 hypothetical protein. | Hypothetical protein; KEGG: ath:AT3G17830 DNAJ heat shock family protein. | 0.455 |