STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP80749.1KEGG: fal:FRAAL4294 hypothetical protein. (363 aa)    
Predicted Functional Partners:
ADP78628.1
KEGG: fal:FRAAL6391 hypothetical protein.
  
     0.637
ADP79421.1
PFAM: globin; KEGG: fal:FRAAL3308 hypothetical protein.
  
     0.567
ADP80962.1
PFAM: peptidase C60 sortase A and B; KEGG: fal:FRAAL2262 hypothetical protein.
 
    0.520
ADP78634.1
PFAM: alpha/beta hydrolase fold; KEGG: cai:Caci_3623 hypothetical protein.
 
     0.505
ADP83893.1
PFAM: peptidase C60 sortase A and B; KEGG: gob:Gobs_4117 peptidase C60 sortase A and B.
 
    0.501
ADP84579.1
KEGG: fal:FRAAL0482 putative arylesterase-like.
 
     0.490
ADP83024.1
PFAM: protein of unknown function DUF990; KEGG: fal:FRAAL3906 putative integral membrane transport protein.
  
     0.484
ADP83025.1
PFAM: protein of unknown function DUF990; KEGG: fal:FRAAL3907 putative ABC-type uncharacterized transport system, permease component.
  
     0.476
ADP78470.1
KEGG: fal:FRAAL6520 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.439
ADP78141.1
SMART: protein phosphatase 2C domain protein; KEGG: rci:RRC32 hypothetical protein.
  
 
 0.427
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.