STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP80795.1KEGG: hsl:OE3109F hypothetical protein. (49 aa)    
Predicted Functional Partners:
ADP80796.1
KEGG: mjl:Mjls_4091 hypothetical protein.
       0.565
ADP80797.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mav:MAV_2981 CaiB/BaiF family protein; Belongs to the CoA-transferase III family.
       0.565
ADP80798.1
PFAM: acyl-CoA thioesterase; KEGG: mva:Mvan_2604 hypothetical protein.
       0.565
ADP80799.1
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rop:ROP_71760 putative acetyl-CoA acyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
       0.471
ADP80800.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: mav:MAV_1618 acyl-CoA dehydrogenase domain-containing protein.
       0.471
ADP80801.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: mpa:MAP1748c hypothetical protein.
       0.471
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.