STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP80807.1PFAM: amidohydrolase 2; KEGG: mkm:Mkms_2579 amidohydrolase 2. (444 aa)    
Predicted Functional Partners:
ADP83297.1
KEGG: rop:ROP_71030 hypothetical protein.
 
     0.667
ADP80803.1
Hypothetical protein; Manually curated; KEGG: rop:ROP_71030 hypothetical protein.
 
     0.659
ADP83543.1
KEGG: fal:FRAAL1951 hypothetical protein.
 
     0.613
ADP82424.1
PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: mjl:Mjls_4789 SMP-30/gluconolaconase/LRE domain-containing protein.
 
    0.552
ADP80808.1
KEGG: rha:RHA1_ro10343 acetyl-CoA acetyltransferase.
       0.470
ADP82816.1
KEGG: sro:Sros_4880 hypothetical protein.
 
 
  0.441
ADP81341.1
KEGG: fal:FRAAL4864 hypothetical protein.
 
     0.412
ADP83733.1
KEGG: fal:FRAAL0319 putative signal peptide.
 
     0.411
ADP80087.1
KEGG: gbr:Gbro_3851 hypothetical protein.
 
     0.405
ADP83228.1
PFAM: Amidohydrolase 3; KEGG: fal:FRAAL3790 hypothetical protein.
 
     0.401
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.