STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP81782.1KEGG: cwo:Cwoe_0302 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (242 aa)    
Predicted Functional Partners:
ADP81783.1
PFAM: protein of unknown function DUF214; KEGG: scb:SCAB_33631 putative ABC transporter transmembrane subunit.
 
  
 0.943
ADP84773.1
PFAM: protein of unknown function DUF214; KEGG: cai:Caci_0680 protein of unknown function DUF214.
  
 
 0.935
ADP81781.1
Transcriptional regulator, PadR-like family; KEGG: scb:SCAB_33611 putative PadR family regulator; manually curated; PFAM: transcriptional regulator PadR family protein.
 
     0.908
ADP79501.1
PFAM: protein of unknown function DUF214; KEGG: sro:Sros_0308 ABC transporter related protein.
 
 0.798
ADP82276.1
Manually curated; PFAM: AAA ATPase central domain protein; KEGG: cai:Caci_2076 AAA ATPase central domain protein; SMART: AAA ATPase; Belongs to the AAA ATPase family.
 
     0.600
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
   
 0.589
ADP79503.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cai:Caci_1030 peptidoglycan-binding domain 1 protein.
  
 
 0.575
ADP80440.1
PFAM: protein of unknown function DUF214; KEGG: sna:Snas_5641 hypothetical protein.
  
 
 0.574
ADP81008.1
PFAM: protein of unknown function DUF214; KEGG: lxx:Lxx03110 integral membrane protein.
  
 
 0.574
ADP84794.1
PFAM: protein of unknown function DUF214; KEGG: hypothetical protein.
  
 
 0.574
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.