STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP81952.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gbr:Gbro_3870 short-chain dehydrogenase/reductase SDR. (271 aa)    
Predicted Functional Partners:
ADP83450.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3125c hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.765
ADP81345.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mav:MAV_1633 NAD dependent epimerase/dehydratase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.764
ADP82990.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_1948 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.764
ADP83623.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_1948 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.739
ADP82321.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3261c hypothetical protein.
 
    0.656
ADP83906.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL1427 putative short-chain dehydrogenase/oxidoreductase (partial); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.654
ADP81951.1
PFAM: protein of unknown function DUF35; KEGG: mkm:Mkms_3765 hypothetical protein.
  
 
 0.623
ADP81953.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL0316 carveol dehydrogenase.
 
    
0.598
ADP83739.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.582
ADP78677.1
KEGG: fal:FRAAL4277 hypothetical protein.
   
 0.556
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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