STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP82072.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mgi:Mflv_2430 short-chain dehydrogenase/reductase SDR. (278 aa)    
Predicted Functional Partners:
ADP79071.1
KEGG: nfa:nfa34420 hypothetical protein.
 
   
 0.754
ADP79070.1
PFAM: Radical SAM domain protein; KEGG: fal:FRAAL3572 coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E).
 
   
 0.741
ADP82070.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: nca:Noca_4130 acyl-CoA dehydrogenase domain-containing protein.
  
  0.700
ADP79073.1
PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL5863 putative glycosyl transferase.
 
     0.676
ADP82071.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: mav:MAV_1392 hypothetical protein.
       0.646
ADP82665.1
PFAM: regulatory protein TetR; KEGG: fal:FRAAL4318 TetR family transcriptional regulator.
 
     0.632
ADP78677.1
KEGG: fal:FRAAL4277 hypothetical protein.
   
 0.556
ADP84979.1
SMART: heat shock protein DnaJ domain protein; KEGG: hypothetical protein.
   
 0.556
ADP83918.1
Histidine kinase; KEGG: rop:ROP_38810 putative two-component histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 0.551
ADP81323.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_1991 short-chain dehydrogenase/reductase SDR.
  
     0.547
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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