STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP82416.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mgi:Mflv_2501 short-chain dehydrogenase/reductase SDR. (247 aa)    
Predicted Functional Partners:
ADP82418.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: mav:MAV_5203 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
 0.879
ADP82417.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: mpa:MAP3135c hypothetical protein.
       0.784
ADP82415.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: mav:MAV_1392 hypothetical protein.
       0.710
ADP82419.1
PFAM: Flavin-containing monooxygenase-like; KEGG: mpa:MAP3509 hypothetical protein.
  
 
 0.664
ADP78677.1
KEGG: fal:FRAAL4277 hypothetical protein.
   
 0.556
ADP84979.1
SMART: heat shock protein DnaJ domain protein; KEGG: hypothetical protein.
   
 0.556
ADP81341.1
KEGG: fal:FRAAL4864 hypothetical protein.
 
 0.542
ADP78973.1
PFAM: Ankyrin; KEGG: aac:Aaci_3059 ankyrin.
   
 0.527
ADP80186.1
KEGG: mab:MAB_1333 hypothetical protein.
   
 0.527
ADP81560.1
Ankyrin; KEGG: aac:Aaci_3059 ankyrin; PFAM: Ankyrin; SMART: Ankyrin.
   
 0.527
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.