STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP83340.1Transcriptional regulator, IclR family; KEGG: mjl:Mjls_3792 regulatory proteins, IclR; PFAM: regulatory protein IclR; SMART: regulatory protein IclR. (240 aa)    
Predicted Functional Partners:
ADP83345.1
PFAM: monooxygenase FAD-binding; KEGG: msm:MSMEG_4866 3-(3-hydroxyphenyl)propionate hydroxylase.
 
   
 0.801
ADP83344.1
PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_4246 alpha/beta hydrolase fold.
 
  
 0.731
ADP83343.1
KEGG: nfa:nfa33180 putative hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase.
  
  
 0.694
ADP83342.1
Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
 0.684
ADP83341.1
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
     
 0.671
ADP81837.1
Urea carboxylase; SMART: Allophanate hydrolase subunit 2; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; TIGRFAM: urea carboxylase; urea amidolyase related protein; KEGG: cmi:CMM_0120 putative UreA amidolyase; PFAM: Allophanate hydrolase subunit 2; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding.
  
    0.587
ADP83346.1
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro01533 long-chain-fatty-acid--CoA ligase.
   
 
 0.530
ADP83339.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rop:ROP_70950 putative oxidoreductase.
  
    0.473
ADP79069.1
Regulatory protein MarR; KEGG: fal:FRAAL5864 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
  
 0.472
ADP81317.1
Regulatory protein GntR HTH; KEGG: mmi:MMAR_3975 FadR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: GntR domain protein; regulatory protein GntR HTH.
 
  
 0.454
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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