STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP83556.1PFAM: GCN5-related N-acetyltransferase; KEGG: ami:Amir_1478 GCN5-related N-acetyltransferase. (162 aa)    
Predicted Functional Partners:
ADP83001.1
KEGG: tfu:Tfu_2819 hypothetical protein.
  
    0.603
ADP83002.1
PFAM: band 7 protein; KEGG: tfu:Tfu_2818 hypothetical protein.
  
     0.545
ADP83219.1
KEGG: fal:FRAAL0629 putative acetyltranferase.
 
 
 0.477
ADP85124.1
PFAM: GCN5-related N-acetyltransferase; KEGG: cai:Caci_6831 GCN5-related N-acetyltransferase.
 
 
 0.477
ADP84170.1
PFAM: peptidase M22 glycoprotease; KEGG: fal:FRAAL1128 hypothetical protein.
  
 
 0.470
ADP82989.1
PFAM: protein of unknown function DUF1778; KEGG: fal:FRAAL1874 hypothetical protein.
   
 
 0.467
ADP83557.1
Manually curated; KEGG: fal:FRAAL5524 putative N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase.
       0.430
ADP82558.1
PFAM: Thioesterase; KEGG: mxa:MXAN_4000 non-ribosomal peptide synthetase.
 
   
 0.428
ADP79430.1
PFAM: Thioesterase; KEGG: mxa:MXAN_4000 non-ribosomal peptide synthetase.
 
   
 0.411
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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