STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP83915.1PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: fal:FRAAL1415 putative nitrilase. (279 aa)    
Predicted Functional Partners:
ADP83914.1
Dihydropyrimidinase; KEGG: fal:FRAAL1416 phenylhydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase.
 
 0.991
ADP81169.1
Dihydropyrimidinase; KEGG: bch:Bcen2424_6618 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase.
 
 0.984
ADP83907.1
PFAM: aminotransferase class-III; KEGG: fal:FRAAL1423 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.960
ADP82634.1
KEGG: msm:MSMEG_0581 4-aminobutyrate transaminase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.937
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.913
panC-2
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.913
ADP83065.1
TIGRFAM: glutamate decarboxylase; KEGG: fal:FRAAL0380 glutamate decarboxylase, PLP-dependent, isozyme beta; PFAM: Pyridoxal-dependent decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.913
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
  0.904
ADP83912.1
PFAM: Luciferase-like, subgroup; KEGG: fal:FRAAL1418 hypothetical protein.
 
     0.797
ADP79477.1
PFAM: Aldehyde Dehydrogenase; KEGG: mpa:MAP2084 hypothetical protein.
  
 0.737
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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