STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP84047.1Protein of unknown function DUF1025; KEGG: fal:FRAAL1269 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1025. (200 aa)    
Predicted Functional Partners:
ADP84046.1
KEGG: fal:FRAAL1270 putative signal peptide.
 
     0.721
ADP84048.1
KEGG: fal:FRAAL1268 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I.
       0.714
ADP79904.1
KEGG: fal:FRAAL5048 hypothetical protein.
  
     0.711
ADP79076.1
PFAM: Methionine synthase vitamin-B12 independent; KEGG: fal:FRAAL5860 hypothetical protein.
  
     0.606
ADP79247.1
Hypothetical protein; KEGG: fal:FRAAL5683 putative DNA-binding protein.
  
   
 0.573
ADP78095.1
KEGG: fal:FRAAL0011 hypothetical protein.
 
     0.559
ADP79147.1
PFAM: Protein of unknown function DUF2469; KEGG: fal:FRAAL5786 hypothetical protein.
  
     0.536
ADP79164.1
PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL5771 hypothetical protein.
  
     0.525
ADP80363.1
KEGG: fal:FRAAL2135 hypothetical protein.
  
     0.524
ADP78188.1
KEGG: fal:FRAAL6731 hypothetical protein.
  
     0.491
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.