STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP84098.1KEGG: fal:FRAAL1218 hypothetical protein. (392 aa)    
Predicted Functional Partners:
ADP85069.1
KEGG: fal:FRAAL0093 putative RNA polymerase sigma factor.
 
 
   0.772
ADP84143.1
KEGG: fal:FRAAL1158 hypothetical protein.
 
  
 0.674
ADP85123.1
KEGG: fal:FRAAL6845 hypothetical protein.
 
     0.664
ADP82974.1
KEGG: tcr:506959.90 hypothetical protein.
  
     0.656
ADP78158.1
Peptidase C2 calpain; KEGG: fal:FRAAL6773 hypothetical protein; PFAM: peptidase C2 calpain; SMART: peptidase C2 calpain.
 
   
 0.623
ADP84243.1
Hypothetical protein; KEGG: lma:LmjF35.0540 proteophosphoglycan 5.
  
     0.588
ADP78846.1
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: fal:FRAAL6035 putative nucleotide pyrophosphatase.
 
     0.584
ADP79047.1
KEGG: fal:FRAAL5892 hypothetical protein.
  
     0.582
ADP83743.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; Manually curated; PFAM: ABC transporter related; Forkhead-associated protein; ABC-2 type transporter; KEGG: fal:FRAAL4153 putative ABC transporter; SMART: Forkhead-associated protein; AAA ATPase.
 
 
 0.576
ADP83096.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; KEGG: fal:FRAAL1896 putative ABC transporter ATP-binding protein; putative membrane protein; PFAM: ABC transporter related; Forkhead-associated protein; ABC-2 type transporter; SMART: Forkhead-associated protein; AAA ATPase.
 
 
 0.561
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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