STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP84415.1PFAM: DnaB domain protein helicase domain protein; KEGG: mjl:Mjls_2266 hypothetical protein. (483 aa)    
Predicted Functional Partners:
ADP85126.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
  
0.940
ADP84416.1
Hypothetical protein; KEGG: eba:ebA6811 squalene/phytoene dehydrogenase.
       0.773
ADP84417.1
KEGG: sna:Snas_5423 hypothetical protein.
       0.773
ADP84418.1
KEGG: mgi:Mflv_2925 hypothetical protein.
       0.773
ADP84413.1
KEGG: ach:Achl_0198 PfkB domain protein.
       0.519
ADP84414.1
KEGG: cai:Caci_1685 hypothetical protein.
       0.519
ADP80407.1
Peptidoglycan glycosyltransferase; KEGG: fal:FRAAL2190 cell division protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
  
     0.489
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
  
     0.461
ADP80412.1
KEGG: fal:FRAAL2195 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.
  
     0.443
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination.
 
     0.436
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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