STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP84575.1KEGG: sco:SCO5065 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR. (949 aa)    
Predicted Functional Partners:
ADP84015.1
PAS fold-3 domain protein; KEGG: fal:FRAAL1318 putative two-component hybrid sensor and regulator; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
 
 0.826
ADP81230.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: fal:FRAAL3242 sensor histidine kinase; SMART: GGDEF domain containing protein.
  
 
 0.820
ADP83602.1
GAF sensor hybrid histidine kinase; KEGG: fal:FRAAL6455 putative two-component system sensory histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein; response regulator receiver.
  
 
 0.698
ADP82918.1
Protein serine/threonine phosphatase; KEGG: fal:FRAAL4851 putative regulatory protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein.
 
 
 0.528
ADP84574.1
KEGG: rha:RHA1_ro02622 response regulator, two-component system; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.528
ADP78438.1
Integral membrane sensor signal transduction histidine kinase; KEGG: fal:FRAAL2981 putative two-component sensor; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.517
ADP80713.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; KEGG: sus:Acid_3859 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein.
  
 
 0.512
ADP81139.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E; PAS fold domain protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: kfl:Kfla_4457 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein.
  
 
 0.510
ADP83945.1
Integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: sro:Sros_7302 putative two-component system sensor kinase.
 
 
 0.509
ADP78609.1
GAF sensor hybrid histidine kinase; KEGG: fal:FRAAL6414 putative two-component system sensory histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein.
  
 
 0.508
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.