STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP84962.1Manually curated; PFAM: HNH endonuclease; KEGG: fal:FRAAL4530 hypothetical protein; SMART: HNH nuclease. (488 aa)    
Predicted Functional Partners:
ADP85165.1
HNH endonuclease; KEGG: fal:FRAAL2156 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
     0.735
ADP80395.1
KEGG: fal:FRAAL2178 hypothetical protein.
 
   
 0.571
ADP84858.1
HhH-GPD family protein; KEGG: fal:FRAAL0558 hypothetical protein; TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein.
 
     0.564
ADP84963.1
KEGG: mmi:MMAR_5262 hypothetical protein.
       0.488
ADP79661.1
Protein of unknown function DUF2277; KEGG: fal:FRAAL3919 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2277.
  
     0.436
ADP84010.1
PFAM: TadE family protein; KEGG: fal:FRAAL1323 hypothetical protein.
 
     0.425
ADP78536.1
KEGG: nca:Noca_2322 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII.
 
  
 0.403
ADP80396.1
PFAM: UMUC domain protein DNA-repair protein; KEGG: fal:FRAAL2179 putative DNA-directed DNA polymerase.
 
  
 0.400
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.