STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP85019.1KEGG: npu:Npun_F1409 hypothetical protein. (355 aa)    
Predicted Functional Partners:
ADP85022.1
PFAM: GPW/gp25 family protein; KEGG: npu:Npun_F1411 gpW/GP25 family protein.
 
 
 0.997
ADP85020.1
KEGG: npu:Npun_F1410 rhs element Vgr protein.
   
 0.995
ADP85011.1
KEGG: hoh:Hoch_3656 tail sheath protein.
 
 
 0.987
ADP85012.1
KEGG: npu:Npun_F1403 phage tail sheath protein fi-like protein.
 
 
 0.987
ADP85016.1
TIGRFAM: conserved hypothetical protein; KEGG: npu:Npun_F1406 phage tail protein.
 
 
   0.986
ADP85018.1
KEGG: gsu:GSU0981 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
   0.986
ADP85025.1
KEGG: npu:Npun_F1414 phage tail protein.
 
  
 0.973
ADP85024.1
PFAM: Baseplate J family protein; KEGG: npu:Npun_F1413 hypothetical protein.
 
 
   0.969
ADP85023.1
PFAM: Baseplate J family protein; KEGG: npu:Npun_F1412 hypothetical protein.
 
 
   0.968
ADP85013.1
KEGG: npu:Npun_F1404 phage tail protein; TIGRFAM: conserved hypothetical protein; PFAM: Phage T4-like virus tail tube gp19.
 
 
   0.963
Your Current Organism:
Frankia inefficax
NCBI taxonomy Id: 298654
Other names: CECT 9037, DSM 45817, F. inefficax, Frankia inefficax Nouioui et al. 2017, Frankia sp. EuI1c, strain EuI1c
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