STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0225Hypothetical protein. (325 aa)    
Predicted Functional Partners:
DA2_3674
Hypothetical protein.
 
  
 0.818
DA2_2602
Hypothetical protein.
 
    0.762
DA2_0791
Tetratricopeptide repeat family protein.
  
     0.758
DA2_3811
Hypothetical protein.
  
     0.758
DA2_3296
Tetratricopeptide repeat family protein.
  
     0.756
DA2_0267
cgeB family protein.
  
     0.749
DA2_2213
Glycosyl transferase 2 family protein.
 
     0.727
DA2_2749
Tetratricopeptide repeat family protein.
  
     0.727
DA2_3231
Von Willebrand factor type A domain protein.
  
     0.722
DA2_2835
Glycosyl transferase, group 2 family protein.
 
     0.715
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.