STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0231Hypothetical protein. (1228 aa)    
Predicted Functional Partners:
DA2_3732
Hypothetical protein.
  
     0.701
DA2_0456
Hypothetical protein.
  
     0.687
DA2_3650
Putative lipoprotein.
  
     0.643
DA2_0531
Hypothetical protein.
  
     0.628
DA2_3431
MJ0042 family finger-like domain protein.
  
     0.604
DA2_0230
Sensory box protein.
     
 0.580
DA2_0229
Extracellular ligand-binding receptor.
       0.561
DA2_3348
Hypothetical protein.
  
     0.558
DA2_0457
Tetratricopeptide repeat family protein.
  
     0.555
DA2_3132
Bacteriophage CI repressor helix-turn-helix domain protein.
  
     0.549
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.