STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0285GDSL-like Lipase/Acylhydrolase family protein. (210 aa)    
Predicted Functional Partners:
DA2_2595
Permease family protein.
 
 
   0.924
DA2_3202
Hypothetical protein.
  
 0.835
DA2_2594
ABC transporter family protein.
 
     0.724
DA2_0715
Hypothetical protein.
   
 0.627
DA2_1331
Hemolysin-type calcium-binding repeat family protein.
   
 0.627
DA2_1739
Hemolysin-type calcium-binding repeat family protein.
   
 0.627
DA2_2350
Hypothetical protein.
   
 0.627
DA2_3096
NHL repeat family protein.
   
 0.627
DA2_0286
Hypothetical protein.
 
     0.605
DA2_3260
Hypothetical protein.
   
 
 0.596
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.