STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DA2_0447Iron-sulfur cluster binding protein. (475 aa)    
Predicted Functional Partners:
lutA
Lactate utilization protein A.
 
 0.997
DA2_0446
Hypothetical protein.
 
 
 0.990
DA2_2143
Hypothetical protein.
 
 
 0.985
DA2_2138
4Fe-4S binding domain protein.
 
 
 0.922
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.904
DA2_3419
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 0.845
DA2_2828
Pyridine nucleotide-disulfide oxidoreductase family protein.
    
 0.823
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.805
DA2_2561
4Fe-4S binding domain protein.
 
 0.774
DA2_3397
4Fe-4S binding domain protein.
  
 
 0.727
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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