STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oorAOORA subunit of 2-oxoglutarate:acceptor oxidoreductase. (382 aa)    
Predicted Functional Partners:
DA2_0779
4Fe-4S binding domain protein.
 
 0.999
DA2_0781
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
 
 0.999
DA2_0782
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein.
 
 0.999
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 0.998
DA2_0150
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family protein.
 
 0.995
DA2_2357
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
 
 0.994
DA2_2358
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein.
 
 0.985
DA2_2355
4Fe-4S binding domain protein.
 
 0.975
DA2_0149
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein.
 
0.958
sucD
succinyl-CoA ligase [GDP-forming] subunit alpha-2; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
  
 0.933
Your Current Organism:
Desulfovibrio sp. A2
NCBI taxonomy Id: 298701
Other names: D. sp. A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.